To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("davidTiling")

In most cases, you don't need to download the package archive at all.

davidTiling

   

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see davidTiling.

Data and analysis scripts for David, Huber et al. yeast tiling array paper

Bioconductor version: 3.0

This package contains the data for the paper by L. David et al. in PNAS 2006 (PMID 16569694): 8 CEL files of Affymetrix genechips, an ExpressionSet object with the raw feature data, a probe annotation data structure for the chip and the yeast genome annotation (GFF file) that was used. In addition, some custom-written analysis functions are provided, as well as R scripts in the scripts directory.

Author: Wolfgang Huber <huber at ebi.ac.uk>, Joern Toedling <toedling at ebi.ac.uk>

Maintainer: Wolfgang Huber <huber at ebi.ac.uk>

Citation (from within R, enter citation("davidTiling")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("davidTiling")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, Yeast
Version 1.5.1
License LGPL
Depends R (>= 2.10), Biobase(>= 2.5.5), tilingArray, GO.db
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://www.ebi.ac.uk/huber
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source davidTiling_1.5.1.tar.gz
Windows Binary davidTiling_1.5.1.zip
Mac OS X 10.6 (Snow Leopard) davidTiling_1.5.1.tgz
Mac OS X 10.9 (Mavericks) davidTiling_1.5.1.tgz
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/davidTiling/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center