To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("netresponse")

In most cases, you don't need to download the package archive at all.

netresponse

   

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see netresponse.

netresponse: functional network analysis

Bioconductor version: 3.0

Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.

Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Citation (from within R, enter citation("netresponse")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("netresponse")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("netresponse")

 

PDF R Script netresponse
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews CellBiology, Clustering, DifferentialExpression, GeneExpression, Genetics, GraphAndNetwork, Microarray, Network, Software, Transcription
Version 1.16.0
In Bioconductor since BioC 2.7 (R-2.12) (5.5 years)
License GPL (>=2)
Depends R (>= 2.15.1), dmt, igraph, infotheo, ggplot2, graph, mclust, methods, minet, parallel, qvalue, RColorBrewer, reshape, Rgraphviz
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL https://github.com/antagomir/netresponse
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source netresponse_1.16.0.tar.gz
Windows Binary netresponse_1.16.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) netresponse_1.16.0.tgz
Mac OS X 10.9 (Mavericks) netresponse_1.16.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/netresponse/tree/release-3.0
Package Short Url http://bioconductor.org/packages/netresponse/
Package Downloads Report Download Stats

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