To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("affylmGUI")

In most cases, you don't need to download the package archive at all.

affylmGUI

   

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see affylmGUI.

GUI for affy analysis using limma package

Bioconductor version: 3.0

A Graphical User Interface for affy analysis using the limma Microarray package

Author: James Wettenhall and Ken Simpson Division of Genetics and Bioinformatics, WEHI.

Maintainer: Keith Satterley <keith at wehi.edu.au>

Citation (from within R, enter citation("affylmGUI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("affylmGUI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affylmGUI")

 

PDF R Script affylmGUI Vignette
PDF R Script Extracting affy and limma objects from affylmGUI files
PDF   Reference Manual

Details

biocViews DataImport, DifferentialExpression, GUI, Microarray, MultipleComparison, OneChannel, Preprocessing, QualityControl, Software
Version 1.40.2
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License GPL (>=2)
Depends affyPLM, tkrplot
Imports limma, tcltk, affy, BiocInstaller, affyio, R2HTML, xtable, gcrma, AnnotationDbi
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://bioinf.wehi.edu.au/affylmGUI/
Depends On Me oneChannelGUI
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source affylmGUI_1.40.2.tar.gz
Windows Binary affylmGUI_1.40.2.zip
Mac OS X 10.6 (Snow Leopard) affylmGUI_1.40.2.tgz
Mac OS X 10.9 (Mavericks) affylmGUI_1.40.2.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/affylmGUI/tree/release-3.0
Package Short Url http://bioconductor.org/packages/affylmGUI/
Package Downloads Report Download Stats

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