To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Heatplus")

In most cases, you don't need to download the package archive at all.

Heatplus

   

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see Heatplus.

Heatmaps with row and/or column covariates and colored clusters

Bioconductor version: 3.0

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Author: Alexander Ploner <Alexander.Ploner at ki.se>

Maintainer: Alexander Ploner <Alexander.Ploner at ki.se>

Citation (from within R, enter citation("Heatplus")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Heatplus")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Heatplus")

 

PDF R Script Annotated and regular heatmaps
PDF R Script Commented package source
PDF R Script Old functions (deprecated)
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, Software, Visualization
Version 2.12.0
In Bioconductor since BioC 1.8 (R-2.3) (10 years)
License GPL (>= 2)
Depends
Imports graphics, grDevices, stats
LinkingTo
Suggests Biobase, hgu95av2.db, limma
SystemRequirements
Enhances
URL
Depends On Me GeneAnswers, phenoTest, tRanslatome
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Heatplus_2.12.0.tar.gz
Windows Binary Heatplus_2.12.0.zip
Mac OS X 10.6 (Snow Leopard) Heatplus_2.12.0.tgz
Mac OS X 10.9 (Mavericks) Heatplus_2.12.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Heatplus/tree/release-3.0
Package Short Url http://bioconductor.org/packages/Heatplus/
Package Downloads Report Download Stats

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