Collado-Torres L, Jaffe AE and Leek JT (2014). derfinderPlot: Plotting functions for derfinder. https://github.com/lcolladotor/derfinderPlot - R package version 1.0.3, http://www.bioconductor.org/packages/release/bioc/html/derfinderPlot.html.

Collado-Torres L, Frazee AC, Jaffe AE and Leek JT (2014). derfinder: Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution. https://github.com/lcolladotor/derfinder - R package version 1.0.6, http://www.bioconductor.org/packages/release/bioc/html/derfinder.html.